Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 AL391069.4-201ENST00000609583 481 ntBASIC16.47■□□□□ 0.23
CDR2Q01850 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.47■□□□□ 0.23
CDR2Q01850 AC004840.1-201ENST00000636359 365 ntBASIC16.47■□□□□ 0.23
CDR2Q01850 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.47■□□□□ 0.23
CDR2Q01850 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.47■□□□□ 0.23
CDR2Q01850 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.47■□□□□ 0.23
CDR2Q01850 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDR2Q01850 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDR2Q01850 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.46■□□□□ 0.23
CDR2Q01850 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.46■□□□□ 0.23
CDR2Q01850 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.46■□□□□ 0.23
CDR2Q01850 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
CDR2Q01850 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CDR2Q01850 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 ACE3P-201ENST00000423435 1973 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDR2Q01850 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.46■□□□□ 0.23
CDR2Q01850 CICP23-201ENST00000605013 2741 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CDR2Q01850 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 FAM8A3P-201ENST00000427218 844 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 AL589987.1-201ENST00000453380 819 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 AC135586.1-201ENST00000539323 574 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.46■□□□□ 0.23
CDR2Q01850 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.46■□□□□ 0.23
CDR2Q01850 AC106028.4-201ENST00000614509 607 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.46■□□□□ 0.23
CDR2Q01850 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.46■□□□□ 0.23
CDR2Q01850 REXO1L4P-201ENST00000605109 1937 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDR2Q01850 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 AC012508.2-201ENST00000567613 1472 ntBASIC16.46■□□□□ 0.23
CDR2Q01850 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.46■□□□□ 0.23
CDR2Q01850 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.46■□□□□ 0.23
CDR2Q01850 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
CDR2Q01850 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CDR2Q01850 REXO1L2P-201ENST00000425429 2069 ntBASIC16.46■□□□□ 0.22
CDR2Q01850 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.45■□□□□ 0.22
CDR2Q01850 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDR2Q01850 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
CDR2Q01850 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.45■□□□□ 0.22
CDR2Q01850 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 FAM45BP-202ENST00000592932 1624 ntBASIC16.45■□□□□ 0.22
CDR2Q01850 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.45■□□□□ 0.22
CDR2Q01850 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.45■□□□□ 0.22
CDR2Q01850 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.45■□□□□ 0.22
CDR2Q01850 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.45■□□□□ 0.22
CDR2Q01850 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.45■□□□□ 0.22
CDR2Q01850 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.45■□□□□ 0.22
CDR2Q01850 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDR2Q01850 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.45■□□□□ 0.22
CDR2Q01850 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.45■□□□□ 0.22
CDR2Q01850 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.45■□□□□ 0.22
CDR2Q01850 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.45■□□□□ 0.22
CDR2Q01850 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.45■□□□□ 0.22
CDR2Q01850 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.45■□□□□ 0.22
CDR2Q01850 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDR2Q01850 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms