Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.85□□□□□ -0.19
CAV3P56539 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.85□□□□□ -0.19
CAV3P56539 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CAV3P56539 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
CAV3P56539 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CAV3P56539 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CAV3P56539 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.85□□□□□ -0.19
CAV3P56539 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CAV3P56539 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 AC073439.1-201ENST00000624121 1774 ntBASIC13.84□□□□□ -0.19
CAV3P56539 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.84□□□□□ -0.19
CAV3P56539 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 AC136759.1-202ENST00000530858 2194 ntBASIC13.84□□□□□ -0.19
CAV3P56539 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CAV3P56539 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CAV3P56539 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.84□□□□□ -0.19
CAV3P56539 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.84□□□□□ -0.19
CAV3P56539 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.84□□□□□ -0.19
CAV3P56539 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.84□□□□□ -0.19
CAV3P56539 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.84□□□□□ -0.19
CAV3P56539 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 AL161645.1-201ENST00000622716 1255 ntBASIC13.84□□□□□ -0.19
CAV3P56539 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.84□□□□□ -0.19
CAV3P56539 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.84□□□□□ -0.19
CAV3P56539 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CAV3P56539 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CAV3P56539 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CAV3P56539 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
CAV3P56539 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.83□□□□□ -0.19
CAV3P56539 BNIP3P1-202ENST00000550043 1585 ntBASIC13.83□□□□□ -0.19
CAV3P56539 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
CAV3P56539 REXO1L1P-202ENST00000608646 1974 ntBASIC13.83□□□□□ -0.19
CAV3P56539 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CAV3P56539 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CAV3P56539 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CAV3P56539 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CAV3P56539 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CAV3P56539 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.83□□□□□ -0.2
CAV3P56539 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.83□□□□□ -0.2
CAV3P56539 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CAV3P56539 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.83□□□□□ -0.2
CAV3P56539 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.83□□□□□ -0.2
CAV3P56539 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.83□□□□□ -0.2
CAV3P56539 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.83□□□□□ -0.2
CAV3P56539 AP002472.1-201ENST00000577490 586 ntBASIC13.83□□□□□ -0.2
CAV3P56539 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.83□□□□□ -0.2
CAV3P56539 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.83□□□□□ -0.2
CAV3P56539 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CAV3P56539 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms