Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
CMC4P56277 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 AC063926.2-201ENST00000623766 1308 ntBASIC11.47□□□□□ -0.57
CMC4P56277 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
CMC4P56277 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.47□□□□□ -0.57
CMC4P56277 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.47□□□□□ -0.57
CMC4P56277 AC104457.1-201ENST00000401024 814 ntBASIC11.47□□□□□ -0.57
CMC4P56277 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC11.47□□□□□ -0.57
CMC4P56277 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.47□□□□□ -0.57
CMC4P56277 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.47□□□□□ -0.57
CMC4P56277 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC11.47□□□□□ -0.57
CMC4P56277 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.47□□□□□ -0.57
CMC4P56277 AL596325.1-201ENST00000563991 1082 ntBASIC11.47□□□□□ -0.57
CMC4P56277 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
CMC4P56277 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.47□□□□□ -0.57
CMC4P56277 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC11.47□□□□□ -0.57
CMC4P56277 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.47□□□□□ -0.57
CMC4P56277 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
CMC4P56277 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.46□□□□□ -0.57
CMC4P56277 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 AC124283.3-201ENST00000570869 594 ntBASIC11.46□□□□□ -0.57
CMC4P56277 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.46□□□□□ -0.57
CMC4P56277 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 CTBP2P3-201ENST00000585629 1255 ntBASIC11.46□□□□□ -0.57
CMC4P56277 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.46□□□□□ -0.57
CMC4P56277 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CMC4P56277 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.46□□□□□ -0.57
CMC4P56277 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC11.46□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms