Protein–RNA interactions for Protein: P55291

CDH15, Cadherin-15, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH15P55291 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.49□□□□□ -0.09
CDH15P55291 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH15P55291 AC023274.1-201ENST00000418278 595 ntBASIC14.49□□□□□ -0.09
CDH15P55291 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH15P55291 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.49□□□□□ -0.09
CDH15P55291 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH15P55291 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH15P55291 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH15P55291 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH15P55291 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDH15P55291 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH15P55291 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 AL805961.1-202ENST00000641562 540 ntBASIC14.49□□□□□ -0.09
CDH15P55291 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 AP001282.1-201ENST00000531301 1499 ntBASIC14.49□□□□□ -0.09
CDH15P55291 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CDH15P55291 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 ACE3P-201ENST00000423435 1973 ntBASIC14.49□□□□□ -0.09
CDH15P55291 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CDH15P55291 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH15P55291 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH15P55291 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH15P55291 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CDH15P55291 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH15P55291 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CDH15P55291 PTCHD3P3-201ENST00000403073 906 ntBASIC14.48□□□□□ -0.09
CDH15P55291 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 AC245100.5-201ENST00000452108 331 ntBASIC14.48□□□□□ -0.09
CDH15P55291 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH15P55291 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 MIR4313-201ENST00000580760 101 ntBASIC14.48□□□□□ -0.09
CDH15P55291 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.48□□□□□ -0.09
CDH15P55291 AP001160.2-201ENST00000596071 487 ntBASIC14.48□□□□□ -0.09
CDH15P55291 GGTLC5P-201ENST00000617623 998 ntBASIC14.48□□□□□ -0.09
CDH15P55291 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH15P55291 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.48□□□□□ -0.09
CDH15P55291 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 AC113367.3-201ENST00000508316 1912 ntBASIC14.48□□□□□ -0.09
CDH15P55291 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH15P55291 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CDH15P55291 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH15P55291 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH15P55291 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH15P55291 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH15P55291 TCAF1P1-201ENST00000414990 2232 ntBASIC14.47□□□□□ -0.09
CDH15P55291 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH15P55291 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
CDH15P55291 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH15P55291 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH15P55291 AC006504.4-201ENST00000592118 1568 ntBASIC14.47□□□□□ -0.09
CDH15P55291 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CDH15P55291 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms