Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.12□□□□□ -0.31
NKX2-5P52952 AC073592.5-201ENST00000624854 528 ntBASIC13.12□□□□□ -0.31
NKX2-5P52952 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
NKX2-5P52952 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 AC148477.5-201ENST00000625164 1645 ntBASIC13.12□□□□□ -0.31
NKX2-5P52952 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 AL022323.5-201ENST00000624101 2059 ntBASIC13.12□□□□□ -0.31
NKX2-5P52952 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.12□□□□□ -0.31
NKX2-5P52952 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NKX2-5P52952 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-5P52952 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-5P52952 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-5P52952 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
NKX2-5P52952 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
NKX2-5P52952 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-5P52952 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
NKX2-5P52952 AC007663.1-201ENST00000438948 1240 ntBASIC13.11□□□□□ -0.31
NKX2-5P52952 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-5P52952 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.11□□□□□ -0.31
NKX2-5P52952 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 MIR4313-201ENST00000580760 101 ntBASIC13.11□□□□□ -0.31
NKX2-5P52952 AC079602.3-201ENST00000623931 403 ntBASIC13.11□□□□□ -0.31
NKX2-5P52952 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 AC125634.1-201ENST00000438758 1403 ntBASIC13.11□□□□□ -0.31
NKX2-5P52952 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 AP000437.1-201ENST00000624057 2085 ntBASIC13.11□□□□□ -0.31
NKX2-5P52952 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.11□□□□□ -0.31
NKX2-5P52952 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
NKX2-5P52952 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.11□□□□□ -0.31
NKX2-5P52952 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.1□□□□□ -0.31
NKX2-5P52952 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 AC092117.1-201ENST00000621230 3250 ntBASIC13.1□□□□□ -0.31
NKX2-5P52952 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX2-5P52952 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX2-5P52952 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX2-5P52952 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms