Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.19■□□□□ 0.02
GTF2A1P52655 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.19■□□□□ 0.02
GTF2A1P52655 AC010203.1-204ENST00000548782 407 ntBASIC15.19■□□□□ 0.02
GTF2A1P52655 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 AL031432.5-201ENST00000641059 760 ntBASIC15.19■□□□□ 0.02
GTF2A1P52655 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
GTF2A1P52655 AL139011.1-202ENST00000642063 584 ntBASIC15.19■□□□□ 0.02
GTF2A1P52655 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.19■□□□□ 0.02
GTF2A1P52655 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 AC023090.2-201ENST00000625182 2110 ntBASIC15.19■□□□□ 0.02
GTF2A1P52655 AL135999.2-201ENST00000622438 1686 ntBASIC15.19■□□□□ 0.02
GTF2A1P52655 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 KRT8P10-201ENST00000450021 1447 ntBASIC15.18■□□□□ 0.02
GTF2A1P52655 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
GTF2A1P52655 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GTF2A1P52655 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.18■□□□□ 0.02
GTF2A1P52655 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
GTF2A1P52655 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GTF2A1P52655 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.18■□□□□ 0.02
GTF2A1P52655 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.18■□□□□ 0.02
GTF2A1P52655 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 RNF126P1-202ENST00000569893 925 ntBASIC15.18■□□□□ 0.02
GTF2A1P52655 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
GTF2A1P52655 AL390719.2-201ENST00000606993 987 ntBASIC15.18■□□□□ 0.02
GTF2A1P52655 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
GTF2A1P52655 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.18■□□□□ 0.02
GTF2A1P52655 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
GTF2A1P52655 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 AC015819.3-201ENST00000624305 2674 ntBASIC15.18■□□□□ 0.02
GTF2A1P52655 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GTF2A1P52655 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
GTF2A1P52655 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.17■□□□□ 0.02
GTF2A1P52655 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms