Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF144AP50876 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF144AP50876 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF144AP50876 AC055876.3-201ENST00000431496 288 ntBASIC14.42□□□□□ -0.1
RNF144AP50876 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF144AP50876 MTND4LP12-201ENST00000448237 295 ntBASIC14.42□□□□□ -0.1
RNF144AP50876 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF144AP50876 RFPL4AP1-201ENST00000530883 850 ntBASIC14.42□□□□□ -0.1
RNF144AP50876 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.42□□□□□ -0.1
RNF144AP50876 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.42□□□□□ -0.1
RNF144AP50876 AL158211.3-201ENST00000607385 239 ntBASIC14.42□□□□□ -0.1
RNF144AP50876 AC138649.4-201ENST00000612222 287 ntBASIC14.42□□□□□ -0.1
RNF144AP50876 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF144AP50876 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF144AP50876 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.42□□□□□ -0.1
RNF144AP50876 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.42□□□□□ -0.1
RNF144AP50876 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RNF144AP50876 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RNF144AP50876 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RNF144AP50876 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RNF144AP50876 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF144AP50876 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF144AP50876 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF144AP50876 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNF144AP50876 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
RNF144AP50876 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 TSSK5P-201ENST00000423978 907 ntBASIC14.41□□□□□ -0.1
RNF144AP50876 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF144AP50876 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF144AP50876 SLED1-202ENST00000512051 380 ntBASIC14.41□□□□□ -0.1
RNF144AP50876 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.41□□□□□ -0.1
RNF144AP50876 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.41□□□□□ -0.1
RNF144AP50876 AC015911.4-201ENST00000588022 1070 ntBASIC14.41□□□□□ -0.1
RNF144AP50876 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 AC008738.7-201ENST00000609744 511 ntBASIC14.41□□□□□ -0.1
RNF144AP50876 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RNF144AP50876 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF144AP50876 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RNF144AP50876 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF144AP50876 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 AL009178.2-201ENST00000597278 2719 ntBASIC14.41□□□□□ -0.1
RNF144AP50876 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.41□□□□□ -0.1
RNF144AP50876 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.41□□□□□ -0.1
RNF144AP50876 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RNF144AP50876 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 LINC00528-201ENST00000600723 2160 ntBASIC14.4□□□□□ -0.1
RNF144AP50876 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.4□□□□□ -0.1
RNF144AP50876 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RNF144AP50876 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms