Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
TUBP50607 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBP50607 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBP50607 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBP50607 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBP50607 AC079776.1-201ENST00000401540 1152 ntBASIC16.27■□□□□ 0.2
TUBP50607 ARSEP1-201ENST00000420443 635 ntBASIC16.27■□□□□ 0.2
TUBP50607 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBP50607 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.27■□□□□ 0.2
TUBP50607 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBP50607 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBP50607 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBP50607 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBP50607 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBP50607 AC008735.3-201ENST00000596646 500 ntBASIC16.27■□□□□ 0.2
TUBP50607 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBP50607 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBP50607 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBP50607 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBP50607 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBP50607 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBP50607 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBP50607 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBP50607 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBP50607 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBP50607 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBP50607 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
TUBP50607 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TUBP50607 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TUBP50607 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBP50607 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.26■□□□□ 0.19
TUBP50607 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.26■□□□□ 0.19
TUBP50607 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.26■□□□□ 0.19
TUBP50607 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.26■□□□□ 0.19
TUBP50607 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBP50607 MIR5189-201ENST00000577370 114 ntBASIC16.26■□□□□ 0.19
TUBP50607 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBP50607 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBP50607 AC093813.1-201ENST00000605066 256 ntBASIC16.26■□□□□ 0.19
TUBP50607 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBP50607 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBP50607 AC006058.4-201ENST00000624016 1670 ntBASIC16.26■□□□□ 0.19
TUBP50607 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TUBP50607 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBP50607 AC026748.1-201ENST00000624349 3251 ntBASIC16.26■□□□□ 0.19
TUBP50607 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBP50607 DRD5P1-201ENST00000456605 1438 ntBASIC16.26■□□□□ 0.19
TUBP50607 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBP50607 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBP50607 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBP50607 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.25■□□□□ 0.19
TUBP50607 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.25■□□□□ 0.19
TUBP50607 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TUBP50607 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
TUBP50607 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TUBP50607 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TUBP50607 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TUBP50607 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.25■□□□□ 0.19
TUBP50607 TMEM14DP-201ENST00000422205 345 ntBASIC16.25■□□□□ 0.19
TUBP50607 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 GAPDHP40-201ENST00000505218 1006 ntBASIC16.25■□□□□ 0.19
TUBP50607 USP32P1-208ENST00000506594 1164 ntBASIC16.25■□□□□ 0.19
TUBP50607 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TUBP50607 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.25■□□□□ 0.19
TUBP50607 KRT17P8-201ENST00000540749 863 ntBASIC16.25■□□□□ 0.19
TUBP50607 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TUBP50607 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.25■□□□□ 0.19
TUBP50607 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.25■□□□□ 0.19
TUBP50607 CICP14-201ENST00000629111 2732 ntBASIC16.25■□□□□ 0.19
TUBP50607 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.25■□□□□ 0.19
TUBP50607 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.25■□□□□ 0.19
TUBP50607 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms