Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AL359881.3-201ENST00000602640 1721 ntBASIC12.26□□□□□ -0.45
CDC34P49427 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.26□□□□□ -0.45
CDC34P49427 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.26□□□□□ -0.45
CDC34P49427 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CDC34P49427 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.26□□□□□ -0.45
CDC34P49427 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.26□□□□□ -0.45
CDC34P49427 AC011467.4-201ENST00000594891 528 ntBASIC12.26□□□□□ -0.45
CDC34P49427 AL356488.2-201ENST00000602755 427 ntBASIC12.26□□□□□ -0.45
CDC34P49427 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
CDC34P49427 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.26□□□□□ -0.45
CDC34P49427 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.26□□□□□ -0.45
CDC34P49427 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 AC145098.2-201ENST00000623593 3026 ntBASIC12.26□□□□□ -0.45
CDC34P49427 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
CDC34P49427 AC097359.2-201ENST00000604992 2389 ntBASIC12.26□□□□□ -0.45
CDC34P49427 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.26□□□□□ -0.45
CDC34P49427 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CDC34P49427 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
CDC34P49427 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 AC092135.3-201ENST00000624151 1846 ntBASIC12.25□□□□□ -0.45
CDC34P49427 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC12.25□□□□□ -0.45
CDC34P49427 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.25□□□□□ -0.45
CDC34P49427 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.25□□□□□ -0.45
CDC34P49427 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.25□□□□□ -0.45
CDC34P49427 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 AP000550.4-202ENST00000639755 178 ntBASIC12.25□□□□□ -0.45
CDC34P49427 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.25□□□□□ -0.45
CDC34P49427 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.25□□□□□ -0.45
CDC34P49427 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.25□□□□□ -0.45
CDC34P49427 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms