Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC006548.2-201ENST00000605217 529 ntBASIC16.81■□□□□ 0.28
HTTP42858 HMGB1P24-201ENST00000611897 328 ntBASIC16.81■□□□□ 0.28
HTTP42858 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HTTP42858 AC025183.3-201ENST00000623526 1482 ntBASIC16.81■□□□□ 0.28
HTTP42858 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 KRT18P9-201ENST00000604826 1300 ntBASIC16.8■□□□□ 0.28
HTTP42858 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.8■□□□□ 0.28
HTTP42858 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.8■□□□□ 0.28
HTTP42858 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 AL139339.2-201ENST00000608063 657 ntBASIC16.8■□□□□ 0.28
HTTP42858 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
HTTP42858 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
HTTP42858 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.8■□□□□ 0.28
HTTP42858 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 HLA-DMA-203ENST00000395305 777 ntBASIC16.8■□□□□ 0.28
HTTP42858 AC012441.2-201ENST00000444843 739 ntBASIC16.8■□□□□ 0.28
HTTP42858 RN7SL81P-201ENST00000493781 261 ntBASIC16.8■□□□□ 0.28
HTTP42858 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.8■□□□□ 0.28
HTTP42858 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.8■□□□□ 0.28
HTTP42858 SIGLEC18P-201ENST00000602271 909 ntBASIC16.8■□□□□ 0.28
HTTP42858 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.8■□□□□ 0.28
HTTP42858 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.8■□□□□ 0.28
HTTP42858 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HTTP42858 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.79■□□□□ 0.28
HTTP42858 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.79■□□□□ 0.28
HTTP42858 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.79■□□□□ 0.28
HTTP42858 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC16.79■□□□□ 0.28
HTTP42858 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 AC007952.4-201ENST00000573866 637 ntBASIC16.79■□□□□ 0.28
HTTP42858 AC055811.3-201ENST00000584952 686 ntBASIC16.79■□□□□ 0.28
HTTP42858 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 AL512306.1-201ENST00000432698 848 ntBASIC16.79■□□□□ 0.28
HTTP42858 DUTP3-201ENST00000450025 415 ntBASIC16.79■□□□□ 0.28
HTTP42858 PGAM1P12-201ENST00000505622 748 ntBASIC16.79■□□□□ 0.28
HTTP42858 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 MIR2392-201ENST00000584881 84 ntBASIC16.79■□□□□ 0.28
HTTP42858 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HTTP42858 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HTTP42858 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HTTP42858 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.79■□□□□ 0.28
HTTP42858 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC16.79■□□□□ 0.28
HTTP42858 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.79■□□□□ 0.28
HTTP42858 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.79■□□□□ 0.28
HTTP42858 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.79■□□□□ 0.28
HTTP42858 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.79■□□□□ 0.28
HTTP42858 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC16.79■□□□□ 0.28
HTTP42858 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.79■□□□□ 0.28
HTTP42858 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTTP42858 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.78■□□□□ 0.28
HTTP42858 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTTP42858 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.78■□□□□ 0.28
HTTP42858 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTTP42858 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC16.78■□□□□ 0.28
HTTP42858 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HTTP42858 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HTTP42858 MIR6816-201ENST00000620368 66 ntBASIC16.78■□□□□ 0.28
HTTP42858 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HTTP42858 AC018629.1-201ENST00000623381 1736 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms