Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFC5P40937 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFC5P40937 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFC5P40937 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC5P40937 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.97■□□□□ 0.31
RFC5P40937 ANKRD19P-201ENST00000338192 862 ntBASIC16.97■□□□□ 0.31
RFC5P40937 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC5P40937 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
RFC5P40937 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 CTBP2P5-201ENST00000454986 1264 ntBASIC16.97■□□□□ 0.31
RFC5P40937 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC5P40937 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.97■□□□□ 0.31
RFC5P40937 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.97■□□□□ 0.31
RFC5P40937 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC5P40937 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RFC5P40937 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 AC133552.6-201ENST00000613406 534 ntBASIC16.97■□□□□ 0.31
RFC5P40937 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 MIR6752-201ENST00000618442 71 ntBASIC16.97■□□□□ 0.31
RFC5P40937 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC16.97■□□□□ 0.31
RFC5P40937 COX11-210ENST00000639671 696 ntBASIC16.97■□□□□ 0.31
RFC5P40937 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RFC5P40937 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 AC148477.4-201ENST00000613430 1793 ntBASIC16.97■□□□□ 0.31
RFC5P40937 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC5P40937 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFC5P40937 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 PAUPAR-201ENST00000630360 2965 ntBASIC16.96■□□□□ 0.31
RFC5P40937 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RFC5P40937 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.96■□□□□ 0.31
RFC5P40937 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RFC5P40937 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RFC5P40937 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.96■□□□□ 0.31
RFC5P40937 AC119751.2-201ENST00000504529 210 ntBASIC16.96■□□□□ 0.31
RFC5P40937 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 KRT90P-201ENST00000549264 1064 ntBASIC16.96■□□□□ 0.31
RFC5P40937 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.96■□□□□ 0.31
RFC5P40937 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC5P40937 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFC5P40937 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC5P40937 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.96■□□□□ 0.3
RFC5P40937 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFC5P40937 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFC5P40937 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RFC5P40937 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.96■□□□□ 0.3
RFC5P40937 LRRC59-203ENST00000576448 1531 ntBASIC16.96■□□□□ 0.3
RFC5P40937 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RFC5P40937 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms