Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.97■□□□□ 0.15
SCNN1AP37088 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SCNN1AP37088 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.97■□□□□ 0.15
SCNN1AP37088 AC022616.1-201ENST00000518688 554 ntBASIC15.97■□□□□ 0.15
SCNN1AP37088 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.97■□□□□ 0.15
SCNN1AP37088 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SCNN1AP37088 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SCNN1AP37088 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.97■□□□□ 0.15
SCNN1AP37088 RPSAP52-203ENST00000622976 1023 ntBASIC15.97■□□□□ 0.15
SCNN1AP37088 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.97■□□□□ 0.15
SCNN1AP37088 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SCNN1AP37088 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.97■□□□□ 0.15
SCNN1AP37088 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SCNN1AP37088 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SCNN1AP37088 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 NFIC-211ENST00000641145 8399 ntBASIC15.97■□□□□ 0.15
SCNN1AP37088 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCNN1AP37088 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SCNN1AP37088 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.96■□□□□ 0.15
SCNN1AP37088 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SCNN1AP37088 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SCNN1AP37088 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
SCNN1AP37088 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.96■□□□□ 0.15
SCNN1AP37088 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.96■□□□□ 0.15
SCNN1AP37088 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.96■□□□□ 0.15
SCNN1AP37088 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
SCNN1AP37088 AC093433.1-201ENST00000458048 571 ntBASIC15.96■□□□□ 0.15
SCNN1AP37088 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.96■□□□□ 0.15
SCNN1AP37088 GIMAP3P-201ENST00000495150 836 ntBASIC15.96■□□□□ 0.15
SCNN1AP37088 AC011495.1-201ENST00000498085 584 ntBASIC15.96■□□□□ 0.15
SCNN1AP37088 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.96■□□□□ 0.15
SCNN1AP37088 KRT18P25-201ENST00000508931 1278 ntBASIC15.96■□□□□ 0.15
SCNN1AP37088 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.96■□□□□ 0.15
SCNN1AP37088 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.96■□□□□ 0.15
SCNN1AP37088 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.96■□□□□ 0.15
SCNN1AP37088 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.96■□□□□ 0.15
SCNN1AP37088 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.96■□□□□ 0.15
SCNN1AP37088 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SCNN1AP37088 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.96■□□□□ 0.15
SCNN1AP37088 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCNN1AP37088 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SCNN1AP37088 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SCNN1AP37088 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SCNN1AP37088 LINC00528-201ENST00000600723 2160 ntBASIC15.96■□□□□ 0.14
SCNN1AP37088 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SCNN1AP37088 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SCNN1AP37088 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SCNN1AP37088 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCNN1AP37088 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCNN1AP37088 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.95■□□□□ 0.14
SCNN1AP37088 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.95■□□□□ 0.14
SCNN1AP37088 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCNN1AP37088 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCNN1AP37088 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms