Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMGCLP35914 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGCLP35914 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGCLP35914 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 RN7SL692P-201ENST00000464677 288 ntBASIC15.31■□□□□ 0.04
HMGCLP35914 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HMGCLP35914 AP005018.1-201ENST00000525475 301 ntBASIC15.31■□□□□ 0.04
HMGCLP35914 AP001582.1-201ENST00000525856 295 ntBASIC15.31■□□□□ 0.04
HMGCLP35914 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HMGCLP35914 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.31■□□□□ 0.04
HMGCLP35914 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HMGCLP35914 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
HMGCLP35914 AL596325.1-201ENST00000563991 1082 ntBASIC15.31■□□□□ 0.04
HMGCLP35914 CLUHP6-201ENST00000580789 941 ntBASIC15.31■□□□□ 0.04
HMGCLP35914 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 AL360270.3-201ENST00000609118 1348 ntBASIC15.31■□□□□ 0.04
HMGCLP35914 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.31■□□□□ 0.04
HMGCLP35914 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMGCLP35914 AL359258.3-201ENST00000622910 2331 ntBASIC15.31■□□□□ 0.04
HMGCLP35914 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMGCLP35914 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HMGCLP35914 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCLP35914 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCLP35914 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCLP35914 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 AL035633.1-201ENST00000406139 838 ntBASIC15.3■□□□□ 0.04
HMGCLP35914 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.3■□□□□ 0.04
HMGCLP35914 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.3■□□□□ 0.04
HMGCLP35914 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCLP35914 COX20P2-201ENST00000452636 358 ntBASIC15.3■□□□□ 0.04
HMGCLP35914 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.3■□□□□ 0.04
HMGCLP35914 AC011495.1-201ENST00000498085 584 ntBASIC15.3■□□□□ 0.04
HMGCLP35914 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.3■□□□□ 0.04
HMGCLP35914 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMGCLP35914 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms