Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
RORAP35398 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.68□□□□□ -0.06
RORAP35398 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RORAP35398 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RORAP35398 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
RORAP35398 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.67□□□□□ -0.06
RORAP35398 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
RORAP35398 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.67□□□□□ -0.06
RORAP35398 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.67□□□□□ -0.06
RORAP35398 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
RORAP35398 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.67□□□□□ -0.06
RORAP35398 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.67□□□□□ -0.06
RORAP35398 RPL7P3-201ENST00000441388 714 ntBASIC14.67□□□□□ -0.06
RORAP35398 BNIP3P42-201ENST00000454982 569 ntBASIC14.67□□□□□ -0.06
RORAP35398 AC106760.1-201ENST00000508690 800 ntBASIC14.67□□□□□ -0.06
RORAP35398 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.67□□□□□ -0.06
RORAP35398 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.67□□□□□ -0.06
RORAP35398 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.67□□□□□ -0.06
RORAP35398 BNIP3P29-201ENST00000598302 571 ntBASIC14.67□□□□□ -0.06
RORAP35398 AC011447.5-201ENST00000616168 564 ntBASIC14.67□□□□□ -0.06
RORAP35398 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
RORAP35398 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
RORAP35398 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.67□□□□□ -0.06
RORAP35398 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.67□□□□□ -0.06
RORAP35398 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RORAP35398 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.66□□□□□ -0.06
RORAP35398 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.66□□□□□ -0.06
RORAP35398 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.66□□□□□ -0.06
RORAP35398 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.66□□□□□ -0.06
RORAP35398 AC007551.1-201ENST00000457394 519 ntBASIC14.66□□□□□ -0.06
RORAP35398 FTH1P14-201ENST00000482930 551 ntBASIC14.66□□□□□ -0.06
RORAP35398 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.66□□□□□ -0.06
RORAP35398 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.66□□□□□ -0.06
RORAP35398 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.66□□□□□ -0.06
RORAP35398 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.66□□□□□ -0.06
RORAP35398 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.66□□□□□ -0.06
RORAP35398 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 GNRHR2-203ENST00000581100 1187 ntBASIC14.66□□□□□ -0.06
RORAP35398 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.66□□□□□ -0.06
RORAP35398 MIR6799-201ENST00000620297 69 ntBASIC14.66□□□□□ -0.06
RORAP35398 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.66□□□□□ -0.06
RORAP35398 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 AC007950.2-201ENST00000615045 2347 ntBASIC14.66□□□□□ -0.06
RORAP35398 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RORAP35398 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.66□□□□□ -0.06
RORAP35398 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RORAP35398 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RORAP35398 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RORAP35398 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RORAP35398 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RORAP35398 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RORAP35398 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms