Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA3P32297 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA3P32297 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA3P32297 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CHRNA3P32297 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CHRNA3P32297 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
CHRNA3P32297 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 SERBP1P3-201ENST00000459980 809 ntBASIC16.3■□□□□ 0.2
CHRNA3P32297 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 TERF1P3-201ENST00000505638 1227 ntBASIC16.3■□□□□ 0.2
CHRNA3P32297 AC009407.1-201ENST00000568958 598 ntBASIC16.3■□□□□ 0.2
CHRNA3P32297 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CHRNA3P32297 AL161772.1-201ENST00000610494 4412 ntBASIC16.3■□□□□ 0.2
CHRNA3P32297 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CHRNA3P32297 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA3P32297 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.3■□□□□ 0.2
CHRNA3P32297 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CHRNA3P32297 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA3P32297 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 AC007686.3-201ENST00000619017 3487 ntBASIC16.29■□□□□ 0.2
CHRNA3P32297 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA3P32297 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA3P32297 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA3P32297 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
CHRNA3P32297 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA3P32297 RN7SL618P-201ENST00000477850 296 ntBASIC16.29■□□□□ 0.2
CHRNA3P32297 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.29■□□□□ 0.2
CHRNA3P32297 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA3P32297 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.29■□□□□ 0.2
CHRNA3P32297 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA3P32297 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 AL607033.1-201ENST00000623900 1599 ntBASIC16.29■□□□□ 0.2
CHRNA3P32297 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA3P32297 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA3P32297 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.29■□□□□ 0.2
CHRNA3P32297 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.29■□□□□ 0.2
CHRNA3P32297 MYO15B-237ENST00000642007 4893 ntBASIC16.29■□□□□ 0.2
CHRNA3P32297 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CHRNA3P32297 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CHRNA3P32297 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 AC005912.2-201ENST00000619492 2400 ntBASIC16.28■□□□□ 0.2
CHRNA3P32297 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA3P32297 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CHRNA3P32297 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.28■□□□□ 0.2
CHRNA3P32297 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.28■□□□□ 0.2
CHRNA3P32297 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHRNA3P32297 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 AL035633.1-201ENST00000406139 838 ntBASIC16.28■□□□□ 0.2
CHRNA3P32297 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNA3P32297 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNA3P32297 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 SERBP1P5-201ENST00000510079 1181 ntBASIC16.28■□□□□ 0.2
CHRNA3P32297 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.28■□□□□ 0.2
CHRNA3P32297 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHRNA3P32297 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.28■□□□□ 0.2
CHRNA3P32297 AL512361.1-201ENST00000554200 418 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms