Protein–RNA interactions for Protein: P30084

ECHS1, Enoyl-CoA hydratase, mitochondrial, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1P30084 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC15.76■□□□□ 0.11
ECHS1P30084 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 AL354702.1-201ENST00000442006 1960 ntBASIC15.76■□□□□ 0.11
ECHS1P30084 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ECHS1P30084 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.76■□□□□ 0.11
ECHS1P30084 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.76■□□□□ 0.11
ECHS1P30084 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ECHS1P30084 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ECHS1P30084 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
ECHS1P30084 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.75■□□□□ 0.11
ECHS1P30084 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.75■□□□□ 0.11
ECHS1P30084 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.75■□□□□ 0.11
ECHS1P30084 AC105206.1-202ENST00000314927 2368 ntBASIC15.75■□□□□ 0.11
ECHS1P30084 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
ECHS1P30084 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ECHS1P30084 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 SLED1-202ENST00000512051 380 ntBASIC15.75■□□□□ 0.11
ECHS1P30084 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.75■□□□□ 0.11
ECHS1P30084 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.75■□□□□ 0.11
ECHS1P30084 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.75■□□□□ 0.11
ECHS1P30084 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.75■□□□□ 0.11
ECHS1P30084 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ECHS1P30084 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ECHS1P30084 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.74■□□□□ 0.11
ECHS1P30084 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.74■□□□□ 0.11
ECHS1P30084 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
ECHS1P30084 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ECHS1P30084 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ECHS1P30084 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
ECHS1P30084 AL133267.1-201ENST00000398220 340 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 FAM58CP-201ENST00000435741 640 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 SPDYE11-202ENST00000450699 704 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.74■□□□□ 0.11
ECHS1P30084 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.74■□□□□ 0.11
ECHS1P30084 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.74■□□□□ 0.11
ECHS1P30084 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
ECHS1P30084 AC106730.1-201ENST00000566722 1090 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 SPDYE9P-201ENST00000570642 692 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 SPDYE10P-202ENST00000612005 668 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 SPDYE8P-202ENST00000612377 668 ntBASIC15.74■□□□□ 0.11
ECHS1P30084 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.74■□□□□ 0.11
ECHS1P30084 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.74■□□□□ 0.11
ECHS1P30084 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
ECHS1P30084 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.74■□□□□ 0.11
ECHS1P30084 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ECHS1P30084 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms