Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP8P22894 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP8P22894 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP8P22894 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP8P22894 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.18■□□□□ 0.18
MMP8P22894 AC093813.1-201ENST00000605066 256 ntBASIC16.18■□□□□ 0.18
MMP8P22894 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
MMP8P22894 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP8P22894 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MMP8P22894 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.18■□□□□ 0.18
MMP8P22894 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.18■□□□□ 0.18
MMP8P22894 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC16.18■□□□□ 0.18
MMP8P22894 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
MMP8P22894 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
MMP8P22894 AC068418.2-201ENST00000577309 3703 ntBASIC16.18■□□□□ 0.18
MMP8P22894 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MMP8P22894 INTS4P2-202ENST00000614726 2019 ntBASIC16.18■□□□□ 0.18
MMP8P22894 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP8P22894 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP8P22894 LILRP1-201ENST00000444199 1370 ntBASIC16.17■□□□□ 0.18
MMP8P22894 AL391825.1-201ENST00000457671 1364 ntBASIC16.17■□□□□ 0.18
MMP8P22894 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 AC099063.4-201ENST00000641099 1602 ntBASIC16.17■□□□□ 0.18
MMP8P22894 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 AC106881.1-201ENST00000605849 3329 ntBASIC16.17■□□□□ 0.18
MMP8P22894 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP8P22894 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP8P22894 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP8P22894 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.17■□□□□ 0.18
MMP8P22894 AC120045.2-201ENST00000567334 178 ntBASIC16.17■□□□□ 0.18
MMP8P22894 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.17■□□□□ 0.18
MMP8P22894 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
MMP8P22894 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.17■□□□□ 0.18
MMP8P22894 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MMP8P22894 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
MMP8P22894 AL157414.3-201ENST00000624276 1954 ntBASIC16.17■□□□□ 0.18
MMP8P22894 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.16■□□□□ 0.18
MMP8P22894 AC007541.1-201ENST00000570282 1469 ntBASIC16.16■□□□□ 0.18
MMP8P22894 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 AL158070.2-201ENST00000623713 1621 ntBASIC16.16■□□□□ 0.18
MMP8P22894 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.16■□□□□ 0.18
MMP8P22894 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MMP8P22894 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 AL645937.2-201ENST00000396808 931 ntBASIC16.16■□□□□ 0.18
MMP8P22894 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MMP8P22894 AC098850.1-201ENST00000419919 790 ntBASIC16.16■□□□□ 0.18
MMP8P22894 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms