Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TOP2AP11388 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC26.22■■□□□ 1.79
TOP2AP11388 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
TOP2AP11388 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
TOP2AP11388 STRN-202ENST00000379213 2254 ntTSL 5 BASIC26.22■■□□□ 1.79
TOP2AP11388 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC26.22■■□□□ 1.79
TOP2AP11388 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 AC114501.1-201ENST00000445949 172 ntBASIC26.21■■□□□ 1.79
TOP2AP11388 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 DNM1P30-201ENST00000563586 452 ntBASIC26.21■■□□□ 1.79
TOP2AP11388 MIR3188-201ENST00000583494 85 ntBASIC26.21■■□□□ 1.79
TOP2AP11388 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC26.21■■□□□ 1.79
TOP2AP11388 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TOP2AP11388 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC26.21■■□□□ 1.79
TOP2AP11388 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
TOP2AP11388 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TOP2AP11388 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC26.2■■□□□ 1.79
TOP2AP11388 AC007292.2-201ENST00000593524 1812 ntBASIC26.2■■□□□ 1.79
TOP2AP11388 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TOP2AP11388 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
TOP2AP11388 KRT18P66-201ENST00000452970 1269 ntBASIC26.2■■□□□ 1.79
TOP2AP11388 MIR6756-201ENST00000616240 63 ntBASIC26.2■■□□□ 1.79
TOP2AP11388 AC020916.1-201ENST00000587762 1774 ntBASIC26.2■■□□□ 1.79
TOP2AP11388 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TOP2AP11388 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TOP2AP11388 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TOP2AP11388 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TOP2AP11388 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TOP2AP11388 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC26.2■■□□□ 1.78
TOP2AP11388 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC26.19■■□□□ 1.78
TOP2AP11388 PCDHB19P-201ENST00000570871 2371 ntBASIC26.19■■□□□ 1.78
TOP2AP11388 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 RPL13AP19-201ENST00000434320 584 ntBASIC26.19■■□□□ 1.78
TOP2AP11388 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC26.19■■□□□ 1.78
TOP2AP11388 PGAM1P5-201ENST00000548011 764 ntBASIC26.19■■□□□ 1.78
TOP2AP11388 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC26.19■■□□□ 1.78
TOP2AP11388 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC26.19■■□□□ 1.78
TOP2AP11388 KRT8P28-201ENST00000433288 1390 ntBASIC26.19■■□□□ 1.78
TOP2AP11388 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC26.19■■□□□ 1.78
TOP2AP11388 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC26.19■■□□□ 1.78
TOP2AP11388 RBM8B-201ENST00000555532 525 ntBASIC26.19■■□□□ 1.78
TOP2AP11388 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
TOP2AP11388 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
TOP2AP11388 MCC-208ENST00000514701 2855 ntTSL 2 BASIC26.18■■□□□ 1.78
TOP2AP11388 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
TOP2AP11388 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC26.18■■□□□ 1.78
TOP2AP11388 MROH4P-201ENST00000431302 1578 ntBASIC26.18■■□□□ 1.78
TOP2AP11388 AL139384.1-201ENST00000612143 3047 ntBASIC26.18■■□□□ 1.78
TOP2AP11388 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
TOP2AP11388 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC26.18■■□□□ 1.78
TOP2AP11388 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
TOP2AP11388 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 TMBIM7P-202ENST00000641474 1516 ntBASIC26.18■■□□□ 1.78
TOP2AP11388 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC26.18■■□□□ 1.78
TOP2AP11388 AP000358.1-201ENST00000456260 156 ntBASIC26.18■■□□□ 1.78
TOP2AP11388 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
TOP2AP11388 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
TOP2AP11388 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC26.18■■□□□ 1.78
TOP2AP11388 TPM1-223ENST00000560445 485 ntTSL 3 BASIC26.18■■□□□ 1.78
TOP2AP11388 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC26.18■■□□□ 1.78
TOP2AP11388 MIR4649-201ENST00000582839 64 ntBASIC26.18■■□□□ 1.78
TOP2AP11388 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC26.18■■□□□ 1.78
TOP2AP11388 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TOP2AP11388 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms