Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
THRAP10827 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.55■□□□□ 0.08
THRAP10827 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 GK-202ENST00000378941 458 ntTSL 3 BASIC15.55■□□□□ 0.08
THRAP10827 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 DFFBP1-201ENST00000433250 979 ntBASIC15.55■□□□□ 0.08
THRAP10827 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.55■□□□□ 0.08
THRAP10827 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.55■□□□□ 0.08
THRAP10827 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.55■□□□□ 0.08
THRAP10827 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 AC044860.1-202ENST00000559481 777 ntBASIC15.55■□□□□ 0.08
THRAP10827 AL365330.1-201ENST00000607459 531 ntBASIC15.55■□□□□ 0.08
THRAP10827 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
THRAP10827 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.55■□□□□ 0.08
THRAP10827 AL033527.5-202ENST00000641632 1098 ntBASIC15.55■□□□□ 0.08
THRAP10827 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.55■□□□□ 0.08
THRAP10827 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.55■□□□□ 0.08
THRAP10827 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
THRAP10827 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
THRAP10827 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
THRAP10827 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
THRAP10827 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 CU639417.3-201ENST00000624240 1404 ntBASIC15.54■□□□□ 0.08
THRAP10827 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
THRAP10827 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
THRAP10827 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 AC114501.2-201ENST00000439631 535 ntBASIC15.54■□□□□ 0.08
THRAP10827 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 AL139010.1-201ENST00000454878 894 ntBASIC15.54■□□□□ 0.08
THRAP10827 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
THRAP10827 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.54■□□□□ 0.08
THRAP10827 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 AGAP7P-201ENST00000582299 2062 ntBASIC15.54■□□□□ 0.08
THRAP10827 AGAP14-201ENST00000624701 2060 ntBASIC15.54■□□□□ 0.08
THRAP10827 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
THRAP10827 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
THRAP10827 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms