Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.22■□□□□ 0.19
RARAP10276 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RARAP10276 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.22■□□□□ 0.19
RARAP10276 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 CICP14-201ENST00000629111 2732 ntBASIC16.21■□□□□ 0.19
RARAP10276 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RARAP10276 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.21■□□□□ 0.19
RARAP10276 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.21■□□□□ 0.19
RARAP10276 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.21■□□□□ 0.19
RARAP10276 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.21■□□□□ 0.19
RARAP10276 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.21■□□□□ 0.19
RARAP10276 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.21■□□□□ 0.19
RARAP10276 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RARAP10276 AC009407.1-201ENST00000568958 598 ntBASIC16.21■□□□□ 0.19
RARAP10276 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.21■□□□□ 0.19
RARAP10276 AC093512.1-201ENST00000617969 520 ntBASIC16.21■□□□□ 0.19
RARAP10276 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
RARAP10276 AC004461.2-201ENST00000629517 803 ntBASIC16.21■□□□□ 0.19
RARAP10276 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.21■□□□□ 0.19
RARAP10276 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.21■□□□□ 0.19
RARAP10276 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RARAP10276 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RARAP10276 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
RARAP10276 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RARAP10276 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.21■□□□□ 0.18
RARAP10276 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.21■□□□□ 0.18
RARAP10276 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RARAP10276 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RARAP10276 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.2■□□□□ 0.18
RARAP10276 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 AL121723.1-201ENST00000445194 1519 ntBASIC16.2■□□□□ 0.18
RARAP10276 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.2■□□□□ 0.18
RARAP10276 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.2■□□□□ 0.18
RARAP10276 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.2■□□□□ 0.18
RARAP10276 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.2■□□□□ 0.18
RARAP10276 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.2■□□□□ 0.18
RARAP10276 AC114501.2-201ENST00000439631 535 ntBASIC16.2■□□□□ 0.18
RARAP10276 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.2■□□□□ 0.18
RARAP10276 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RARAP10276 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RARAP10276 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.2■□□□□ 0.18
RARAP10276 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.2■□□□□ 0.18
RARAP10276 AL390955.2-201ENST00000603032 514 ntBASIC16.2■□□□□ 0.18
RARAP10276 GPALPP1-207ENST00000611650 899 ntBASIC16.2■□□□□ 0.18
RARAP10276 AL390754.1-201ENST00000619088 582 ntBASIC16.2■□□□□ 0.18
RARAP10276 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RARAP10276 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.2■□□□□ 0.18
RARAP10276 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RARAP10276 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.2■□□□□ 0.18
RARAP10276 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.2■□□□□ 0.18
RARAP10276 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RARAP10276 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.19■□□□□ 0.18
RARAP10276 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms