Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.2■□□□□ 0.5
MYCNP04198 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
MYCNP04198 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MYCNP04198 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.19■□□□□ 0.5
MYCNP04198 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
MYCNP04198 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MYCNP04198 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
MYCNP04198 DUSP19-201ENST00000342619 1117 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MYCNP04198 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.19■□□□□ 0.5
MYCNP04198 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 AC119751.2-201ENST00000504529 210 ntBASIC18.19■□□□□ 0.5
MYCNP04198 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC18.19■□□□□ 0.5
MYCNP04198 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.19■□□□□ 0.5
MYCNP04198 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.19■□□□□ 0.5
MYCNP04198 MTND2P13-201ENST00000577438 1039 ntBASIC18.19■□□□□ 0.5
MYCNP04198 RN7SL339P-201ENST00000580597 296 ntBASIC18.19■□□□□ 0.5
MYCNP04198 MIR4538-201ENST00000581377 78 ntBASIC18.19■□□□□ 0.5
MYCNP04198 AC061975.2-201ENST00000581722 295 ntBASIC18.19■□□□□ 0.5
MYCNP04198 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC18.19■□□□□ 0.5
MYCNP04198 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MYCNP04198 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MYCNP04198 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.19■□□□□ 0.5
MYCNP04198 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MYCNP04198 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MYCNP04198 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
MYCNP04198 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
MYCNP04198 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MYCNP04198 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
MYCNP04198 AL391256.1-201ENST00000443260 1855 ntBASIC18.18■□□□□ 0.5
MYCNP04198 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MYCNP04198 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 CDC14C-201ENST00000428251 1719 ntBASIC18.18■□□□□ 0.5
MYCNP04198 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MYCNP04198 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
MYCNP04198 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
MYCNP04198 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
MYCNP04198 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.18■□□□□ 0.5
MYCNP04198 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.18■□□□□ 0.5
MYCNP04198 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.18■□□□□ 0.5
MYCNP04198 MORF4L1P6-201ENST00000418771 268 ntBASIC18.18■□□□□ 0.5
MYCNP04198 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 MTND3P4-201ENST00000453537 303 ntBASIC18.18■□□□□ 0.5
MYCNP04198 USP9YP10-201ENST00000454868 628 ntBASIC18.18■□□□□ 0.5
MYCNP04198 BTF3L4-204ENST00000484036 941 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
MYCNP04198 USP9YP5-201ENST00000511770 630 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC011352.1-201ENST00000512300 793 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC104989.1-201ENST00000519711 778 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 DUXAP5-201ENST00000529668 529 ntBASIC18.18■□□□□ 0.5
MYCNP04198 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.18■□□□□ 0.5
MYCNP04198 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 AC124947.2-201ENST00000547118 1133 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC012150.1-201ENST00000553075 593 ntTSL 4 BASIC18.18■□□□□ 0.5
MYCNP04198 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MYCNP04198 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC18.18■□□□□ 0.5
MYCNP04198 AC009075.2-201ENST00000568483 301 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC18.18■□□□□ 0.5
MYCNP04198 MIR8072-201ENST00000614241 80 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC009090.3-201ENST00000616553 565 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC009159.2-201ENST00000617603 606 ntBASIC18.18■□□□□ 0.5
MYCNP04198 AC084824.4-201ENST00000620106 731 ntBASIC18.18■□□□□ 0.5
MYCNP04198 GPR182-203ENST00000622922 591 ntBASIC18.18■□□□□ 0.5
MYCNP04198 CASC19-222ENST00000641321 1173 ntBASIC18.18■□□□□ 0.5
MYCNP04198 LINC02228-204ENST00000642115 2962 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms