Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 AL118508.1-201ENST00000613502 2345 ntBASIC16.07■□□□□ 0.16
SOD2P04179 PCDHB19P-201ENST00000570871 2371 ntBASIC16.07■□□□□ 0.16
SOD2P04179 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
SOD2P04179 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SOD2P04179 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SOD2P04179 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SOD2P04179 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
SOD2P04179 CICP11-201ENST00000434745 2827 ntBASIC16.06■□□□□ 0.16
SOD2P04179 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
SOD2P04179 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.06■□□□□ 0.16
SOD2P04179 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 MIR769-201ENST00000390225 118 ntBASIC16.06■□□□□ 0.16
SOD2P04179 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 CYP46A4P-201ENST00000414953 267 ntBASIC16.06■□□□□ 0.16
SOD2P04179 AL008707.1-201ENST00000422498 534 ntBASIC16.06■□□□□ 0.16
SOD2P04179 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.06■□□□□ 0.16
SOD2P04179 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.06■□□□□ 0.16
SOD2P04179 UPF3AP2-201ENST00000457924 1132 ntBASIC16.06■□□□□ 0.16
SOD2P04179 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.06■□□□□ 0.16
SOD2P04179 AC005740.2-201ENST00000511085 419 ntBASIC16.06■□□□□ 0.16
SOD2P04179 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.06■□□□□ 0.16
SOD2P04179 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.06■□□□□ 0.16
SOD2P04179 AC022748.3-201ENST00000621828 275 ntBASIC16.06■□□□□ 0.16
SOD2P04179 PRAL-201ENST00000624952 3286 ntBASIC16.06■□□□□ 0.16
SOD2P04179 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SOD2P04179 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SOD2P04179 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.05■□□□□ 0.16
SOD2P04179 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SOD2P04179 RN7SKP175-201ENST00000408472 289 ntBASIC16.05■□□□□ 0.16
SOD2P04179 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.05■□□□□ 0.16
SOD2P04179 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.05■□□□□ 0.16
SOD2P04179 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.05■□□□□ 0.16
SOD2P04179 AC105129.2-201ENST00000559536 390 ntBASIC16.05■□□□□ 0.16
SOD2P04179 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.05■□□□□ 0.16
SOD2P04179 MIR4683-201ENST00000579659 81 ntBASIC16.05■□□□□ 0.16
SOD2P04179 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.05■□□□□ 0.16
SOD2P04179 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.05■□□□□ 0.16
SOD2P04179 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.05■□□□□ 0.16
SOD2P04179 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.05■□□□□ 0.16
SOD2P04179 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SOD2P04179 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
SOD2P04179 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SOD2P04179 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
SOD2P04179 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.04■□□□□ 0.16
SOD2P04179 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SOD2P04179 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.04■□□□□ 0.16
SOD2P04179 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.04■□□□□ 0.16
SOD2P04179 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SOD2P04179 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SOD2P04179 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms