Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHRNA1P02708 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA1P02708 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHRNA1P02708 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHRNA1P02708 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.61■□□□□ 0.25
CHRNA1P02708 AP005117.1-202ENST00000581724 1908 ntBASIC16.6■□□□□ 0.25
CHRNA1P02708 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRNA1P02708 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRNA1P02708 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.6■□□□□ 0.25
CHRNA1P02708 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 AL662890.1-201ENST00000396818 632 ntBASIC16.6■□□□□ 0.25
CHRNA1P02708 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.6■□□□□ 0.25
CHRNA1P02708 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRNA1P02708 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRNA1P02708 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.6■□□□□ 0.25
CHRNA1P02708 MIR3619-201ENST00000579667 83 ntBASIC16.6■□□□□ 0.25
CHRNA1P02708 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA1P02708 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHRNA1P02708 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.6■□□□□ 0.25
CHRNA1P02708 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHRNA1P02708 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CHRNA1P02708 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHRNA1P02708 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 CYP46A4P-201ENST00000414953 267 ntBASIC16.59■□□□□ 0.25
CHRNA1P02708 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA1P02708 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.59■□□□□ 0.25
CHRNA1P02708 EIF4HP1-201ENST00000453115 687 ntBASIC16.59■□□□□ 0.25
CHRNA1P02708 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 AC105129.2-201ENST00000559536 390 ntBASIC16.59■□□□□ 0.25
CHRNA1P02708 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.59■□□□□ 0.25
CHRNA1P02708 MIR4683-201ENST00000579659 81 ntBASIC16.59■□□□□ 0.25
CHRNA1P02708 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 FKBP4P6-201ENST00000457486 1332 ntBASIC16.59■□□□□ 0.25
CHRNA1P02708 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA1P02708 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA1P02708 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHRNA1P02708 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA1P02708 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA1P02708 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHRNA1P02708 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHRNA1P02708 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.59■□□□□ 0.25
CHRNA1P02708 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA1P02708 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.58■□□□□ 0.25
CHRNA1P02708 AL513523.2-202ENST00000427283 2040 ntBASIC16.58■□□□□ 0.25
CHRNA1P02708 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.58■□□□□ 0.25
CHRNA1P02708 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.58■□□□□ 0.25
CHRNA1P02708 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA1P02708 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA1P02708 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHRNA1P02708 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHRNA1P02708 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.58■□□□□ 0.24
CHRNA1P02708 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CHRNA1P02708 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms