Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
MT-CO1P00395 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-CO1P00395 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.13
MT-CO1P00395 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
MT-CO1P00395 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-CO1P00395 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-CO1P00395 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-CO1P00395 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
MT-CO1P00395 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
MT-CO1P00395 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-CO1P00395 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.83■□□□□ 0.12
MT-CO1P00395 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-CO1P00395 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.83■□□□□ 0.12
MT-CO1P00395 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-CO1P00395 CU634019.7-201ENST00000624153 1185 ntBASIC15.83■□□□□ 0.12
MT-CO1P00395 FP236241.2-201ENST00000624906 1185 ntBASIC15.83■□□□□ 0.12
MT-CO1P00395 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.83■□□□□ 0.12
MT-CO1P00395 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.83■□□□□ 0.12
MT-CO1P00395 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-CO1P00395 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-CO1P00395 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
MT-CO1P00395 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-CO1P00395 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-CO1P00395 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-CO1P00395 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.83■□□□□ 0.12
MT-CO1P00395 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.83■□□□□ 0.12
MT-CO1P00395 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
MT-CO1P00395 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
MT-CO1P00395 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-CO1P00395 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
MT-CO1P00395 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-CO1P00395 U91328.1-201ENST00000437528 223 ntBASIC15.82■□□□□ 0.12
MT-CO1P00395 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-CO1P00395 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-CO1P00395 RPL13AP25-201ENST00000484130 612 ntBASIC15.82■□□□□ 0.12
MT-CO1P00395 AC026410.3-201ENST00000514280 936 ntBASIC15.82■□□□□ 0.12
MT-CO1P00395 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.82■□□□□ 0.12
MT-CO1P00395 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-CO1P00395 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-CO1P00395 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.82■□□□□ 0.12
MT-CO1P00395 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
MT-CO1P00395 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-CO1P00395 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 AC010319.3-201ENST00000597028 470 ntBASIC15.82■□□□□ 0.12
MT-CO1P00395 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.82■□□□□ 0.12
MT-CO1P00395 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
MT-CO1P00395 AC136621.1-201ENST00000624017 2304 ntBASIC15.82■□□□□ 0.12
MT-CO1P00395 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
MT-CO1P00395 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.81■□□□□ 0.12
MT-CO1P00395 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
MT-CO1P00395 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
MT-CO1P00395 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms