Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MIR4313-201ENST00000580760 101 ntBASIC15.87■□□□□ 0.13
TOP3BO95985 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.87■□□□□ 0.13
TOP3BO95985 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.87■□□□□ 0.13
TOP3BO95985 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
TOP3BO95985 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.87■□□□□ 0.13
TOP3BO95985 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.87■□□□□ 0.13
TOP3BO95985 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.87■□□□□ 0.13
TOP3BO95985 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.87■□□□□ 0.13
TOP3BO95985 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
TOP3BO95985 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.87■□□□□ 0.13
TOP3BO95985 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 AC007686.3-201ENST00000619017 3487 ntBASIC15.87■□□□□ 0.13
TOP3BO95985 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.86■□□□□ 0.13
TOP3BO95985 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.86■□□□□ 0.13
TOP3BO95985 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.86■□□□□ 0.13
TOP3BO95985 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TOP3BO95985 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TOP3BO95985 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 AL009178.2-201ENST00000597278 2719 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
TOP3BO95985 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
TOP3BO95985 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TOP3BO95985 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.86■□□□□ 0.13
TOP3BO95985 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.86■□□□□ 0.13
TOP3BO95985 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.86■□□□□ 0.13
TOP3BO95985 AC055876.2-201ENST00000531834 546 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TOP3BO95985 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TOP3BO95985 AC123567.1-201ENST00000548294 1261 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 AC023310.3-201ENST00000557027 670 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.86■□□□□ 0.13
TOP3BO95985 AC100756.1-201ENST00000562736 682 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 AC138749.3-201ENST00000567691 622 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 AC061975.2-201ENST00000581722 295 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.86■□□□□ 0.13
TOP3BO95985 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TOP3BO95985 AC116165.1-201ENST00000611806 668 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 LINC00528-201ENST00000600723 2160 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TOP3BO95985 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.86■□□□□ 0.13
TOP3BO95985 AC020907.1-201ENST00000616460 1350 ntBASIC15.86■□□□□ 0.13
TOP3BO95985 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.86■□□□□ 0.13
TOP3BO95985 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.86■□□□□ 0.13
TOP3BO95985 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TOP3BO95985 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TOP3BO95985 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.85■□□□□ 0.13
TOP3BO95985 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.85■□□□□ 0.13
TOP3BO95985 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 ELK2AP-201ENST00000392510 1007 ntBASIC15.85■□□□□ 0.13
TOP3BO95985 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TOP3BO95985 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.85■□□□□ 0.13
TOP3BO95985 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.85■□□□□ 0.13
TOP3BO95985 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TOP3BO95985 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.85■□□□□ 0.13
TOP3BO95985 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.85■□□□□ 0.13
TOP3BO95985 AL589987.1-201ENST00000453380 819 ntBASIC15.85■□□□□ 0.13
TOP3BO95985 AC007389.4-201ENST00000454674 793 ntBASIC15.85■□□□□ 0.13
TOP3BO95985 RN7SL618P-201ENST00000477850 296 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms