Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LCA5LO95447 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.36■□□□□ 0.21
LCA5LO95447 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LCA5LO95447 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCA5LO95447 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LCA5LO95447 AC092135.3-201ENST00000624151 1846 ntBASIC16.35■□□□□ 0.21
LCA5LO95447 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.35■□□□□ 0.21
LCA5LO95447 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
LCA5LO95447 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 AC005840.4-201ENST00000541242 2494 ntBASIC16.35■□□□□ 0.21
LCA5LO95447 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.35■□□□□ 0.21
LCA5LO95447 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.35■□□□□ 0.21
LCA5LO95447 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.35■□□□□ 0.21
LCA5LO95447 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.35■□□□□ 0.21
LCA5LO95447 HLA-V-204ENST00000476601 1289 ntBASIC16.35■□□□□ 0.21
LCA5LO95447 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.35■□□□□ 0.21
LCA5LO95447 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LCA5LO95447 AC010336.2-201ENST00000564226 506 ntBASIC16.35■□□□□ 0.21
LCA5LO95447 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 AL691403.2-201ENST00000618460 490 ntBASIC16.35■□□□□ 0.21
LCA5LO95447 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LCA5LO95447 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LCA5LO95447 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC16.35■□□□□ 0.21
LCA5LO95447 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.35■□□□□ 0.21
LCA5LO95447 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.35■□□□□ 0.21
LCA5LO95447 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.35■□□□□ 0.21
LCA5LO95447 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCA5LO95447 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.34■□□□□ 0.21
LCA5LO95447 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.34■□□□□ 0.21
LCA5LO95447 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LCA5LO95447 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LCA5LO95447 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LCA5LO95447 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.34■□□□□ 0.21
LCA5LO95447 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LCA5LO95447 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.34■□□□□ 0.21
LCA5LO95447 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.34■□□□□ 0.21
LCA5LO95447 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.34■□□□□ 0.21
LCA5LO95447 MIR3687-2-201ENST00000577708 61 ntBASIC16.34■□□□□ 0.21
LCA5LO95447 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.34■□□□□ 0.21
LCA5LO95447 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
LCA5LO95447 MIR3687-1-201ENST00000614492 61 ntBASIC16.34■□□□□ 0.21
LCA5LO95447 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.34■□□□□ 0.21
LCA5LO95447 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 BEND3P1-201ENST00000421591 1944 ntBASIC16.34■□□□□ 0.21
LCA5LO95447 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LCA5LO95447 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCA5LO95447 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
LCA5LO95447 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms