Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 SLC25A3P1-201ENST00000443844 931 ntBASIC13.45□□□□□ -0.26
UPK1BO75841 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.45□□□□□ -0.26
UPK1BO75841 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.45□□□□□ -0.26
UPK1BO75841 AP005901.3-202ENST00000581653 237 ntBASIC13.45□□□□□ -0.26
UPK1BO75841 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.45□□□□□ -0.26
UPK1BO75841 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.45□□□□□ -0.26
UPK1BO75841 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.45□□□□□ -0.26
UPK1BO75841 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
UPK1BO75841 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
UPK1BO75841 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UPK1BO75841 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC13.45□□□□□ -0.26
UPK1BO75841 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UPK1BO75841 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 AC090505.1-201ENST00000430515 1834 ntBASIC13.44□□□□□ -0.26
UPK1BO75841 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.44□□□□□ -0.26
UPK1BO75841 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
UPK1BO75841 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.44□□□□□ -0.26
UPK1BO75841 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.44□□□□□ -0.26
UPK1BO75841 AC022447.6-201ENST00000515522 438 ntBASIC13.44□□□□□ -0.26
UPK1BO75841 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.44□□□□□ -0.26
UPK1BO75841 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.44□□□□□ -0.26
UPK1BO75841 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 PCDHB18P-202ENST00000526308 3197 ntBASIC13.44□□□□□ -0.26
UPK1BO75841 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UPK1BO75841 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
UPK1BO75841 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.44□□□□□ -0.26
UPK1BO75841 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
UPK1BO75841 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.43□□□□□ -0.26
UPK1BO75841 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.43□□□□□ -0.26
UPK1BO75841 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
UPK1BO75841 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms