Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.03■□□□□ 0.16
LRCH4O75427 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.03■□□□□ 0.16
LRCH4O75427 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRCH4O75427 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRCH4O75427 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 AC007787.1-201ENST00000588095 1583 ntBASIC16.02■□□□□ 0.16
LRCH4O75427 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.02■□□□□ 0.16
LRCH4O75427 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 MEP1AP4-201ENST00000423244 1087 ntBASIC16.02■□□□□ 0.16
LRCH4O75427 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.02■□□□□ 0.16
LRCH4O75427 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.02■□□□□ 0.16
LRCH4O75427 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.02■□□□□ 0.16
LRCH4O75427 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LRCH4O75427 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.02■□□□□ 0.16
LRCH4O75427 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.02■□□□□ 0.16
LRCH4O75427 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.02■□□□□ 0.16
LRCH4O75427 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.02■□□□□ 0.16
LRCH4O75427 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.02■□□□□ 0.16
LRCH4O75427 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.02■□□□□ 0.16
LRCH4O75427 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.02■□□□□ 0.16
LRCH4O75427 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.02■□□□□ 0.16
LRCH4O75427 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRCH4O75427 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.02■□□□□ 0.15
LRCH4O75427 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
LRCH4O75427 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
LRCH4O75427 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.02■□□□□ 0.15
LRCH4O75427 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.02■□□□□ 0.15
LRCH4O75427 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRCH4O75427 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LRCH4O75427 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.02■□□□□ 0.15
LRCH4O75427 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 AC093525.8-201ENST00000624099 1342 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.01■□□□□ 0.15
LRCH4O75427 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.01■□□□□ 0.15
LRCH4O75427 VDAC1P7-201ENST00000462417 847 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 AC004066.1-201ENST00000502488 802 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 AC093004.1-201ENST00000508850 424 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 SERBP1P5-201ENST00000510079 1181 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 AC055876.2-201ENST00000531834 546 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.01■□□□□ 0.15
LRCH4O75427 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LRCH4O75427 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 BRI3BPP1-201ENST00000594224 787 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 AC092364.2-202ENST00000597012 1073 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 AC099568.2-201ENST00000609194 695 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 AC009118.2-201ENST00000613275 655 ntBASIC16.01■□□□□ 0.15
LRCH4O75427 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.01■□□□□ 0.15
LRCH4O75427 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRCH4O75427 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRCH4O75427 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms