Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
SSSCA1O60232 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.65□□□□□ -0.38
SSSCA1O60232 RPL5P21-201ENST00000404620 815 ntBASIC12.65□□□□□ -0.38
SSSCA1O60232 RPS8P6-201ENST00000426177 609 ntBASIC12.65□□□□□ -0.38
SSSCA1O60232 AC140658.5-201ENST00000438532 169 ntBASIC12.65□□□□□ -0.38
SSSCA1O60232 VN2R19P-201ENST00000442399 1052 ntBASIC12.65□□□□□ -0.38
SSSCA1O60232 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.65□□□□□ -0.38
SSSCA1O60232 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.65□□□□□ -0.38
SSSCA1O60232 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.65□□□□□ -0.38
SSSCA1O60232 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SSSCA1O60232 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.65□□□□□ -0.38
SSSCA1O60232 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SSSCA1O60232 AC010507.1-201ENST00000633895 436 ntBASIC12.65□□□□□ -0.38
SSSCA1O60232 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SSSCA1O60232 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 AL136982.4-201ENST00000437689 1740 ntBASIC12.65□□□□□ -0.38
SSSCA1O60232 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SSSCA1O60232 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.65□□□□□ -0.39
SSSCA1O60232 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SSSCA1O60232 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
SSSCA1O60232 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
SSSCA1O60232 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.64□□□□□ -0.39
SSSCA1O60232 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.64□□□□□ -0.39
SSSCA1O60232 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
SSSCA1O60232 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.64□□□□□ -0.39
SSSCA1O60232 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 RPS2P28-201ENST00000314255 741 ntBASIC12.64□□□□□ -0.39
SSSCA1O60232 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.64□□□□□ -0.39
SSSCA1O60232 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.64□□□□□ -0.39
SSSCA1O60232 HNRNPDP1-201ENST00000439535 754 ntBASIC12.64□□□□□ -0.39
SSSCA1O60232 HCG4P8-203ENST00000443049 980 ntBASIC12.64□□□□□ -0.39
SSSCA1O60232 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.64□□□□□ -0.39
SSSCA1O60232 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.64□□□□□ -0.39
SSSCA1O60232 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.64□□□□□ -0.39
SSSCA1O60232 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.64□□□□□ -0.39
SSSCA1O60232 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 AC113367.3-201ENST00000508316 1912 ntBASIC12.64□□□□□ -0.39
SSSCA1O60232 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SSSCA1O60232 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.64□□□□□ -0.39
SSSCA1O60232 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SSSCA1O60232 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
SSSCA1O60232 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.64□□□□□ -0.39
SSSCA1O60232 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.63□□□□□ -0.39
SSSCA1O60232 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SSSCA1O60232 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms