Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.12□□□□□ -0.63
PAX4O43316 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
PAX4O43316 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC11.12□□□□□ -0.63
PAX4O43316 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.12□□□□□ -0.63
PAX4O43316 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
PAX4O43316 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 AC100757.3-201ENST00000622361 1406 ntBASIC11.11□□□□□ -0.63
PAX4O43316 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PAX4O43316 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PAX4O43316 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PAX4O43316 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
PAX4O43316 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 AC055876.3-201ENST00000431496 288 ntBASIC11.11□□□□□ -0.63
PAX4O43316 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 SDHAP3-202ENST00000515467 728 ntBASIC11.11□□□□□ -0.63
PAX4O43316 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 HNRNPUP1-201ENST00000554987 333 ntBASIC11.11□□□□□ -0.63
PAX4O43316 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.11□□□□□ -0.63
PAX4O43316 AC138649.4-201ENST00000612222 287 ntBASIC11.11□□□□□ -0.63
PAX4O43316 AC048344.4-201ENST00000619744 527 ntBASIC11.11□□□□□ -0.63
PAX4O43316 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.11□□□□□ -0.63
PAX4O43316 SON-203ENST00000381679 7860 ntTSL 5 BASIC11.11□□□□□ -0.63
PAX4O43316 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
PAX4O43316 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.11□□□□□ -0.63
PAX4O43316 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.11□□□□□ -0.63
PAX4O43316 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
PAX4O43316 AC126177.1-201ENST00000547829 2218 ntBASIC11.11□□□□□ -0.63
PAX4O43316 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
PAX4O43316 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
PAX4O43316 AC087499.5-201ENST00000452760 1342 ntBASIC11.1□□□□□ -0.63
PAX4O43316 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC11.1□□□□□ -0.63
PAX4O43316 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.1□□□□□ -0.63
PAX4O43316 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PAX4O43316 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.1□□□□□ -0.63
PAX4O43316 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.1□□□□□ -0.63
PAX4O43316 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.1□□□□□ -0.63
PAX4O43316 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 AC092127.1-201ENST00000567093 3455 ntBASIC11.1□□□□□ -0.63
PAX4O43316 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.1□□□□□ -0.63
PAX4O43316 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
PAX4O43316 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
PAX4O43316 AC136604.1-201ENST00000418535 575 ntBASIC11.1□□□□□ -0.63
PAX4O43316 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.1□□□□□ -0.63
PAX4O43316 HIST3H2BA-201ENST00000436555 524 ntBASIC11.1□□□□□ -0.63
PAX4O43316 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms