Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MPI-203ENST00000535694 1523 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1O14646 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1O14646 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1O14646 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CHD1O14646 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CHD1O14646 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 GEMIN8P4-201ENST00000380526 729 ntBASIC24.01■■□□□ 1.43
CHD1O14646 CSNK1G2P1-201ENST00000442675 955 ntBASIC24.01■■□□□ 1.43
CHD1O14646 DUX4L50-201ENST00000455245 715 ntBASIC24.01■■□□□ 1.43
CHD1O14646 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC24.01■■□□□ 1.43
CHD1O14646 RN7SL277P-201ENST00000481521 288 ntBASIC24.01■■□□□ 1.43
CHD1O14646 CD164-210ENST00000512821 964 ntTSL 2 BASIC24.01■■□□□ 1.43
CHD1O14646 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CHD1O14646 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD1O14646 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CHD1O14646 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CHD1O14646 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC24■■□□□ 1.43
CHD1O14646 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
CHD1O14646 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC24■■□□□ 1.43
CHD1O14646 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC24■■□□□ 1.43
CHD1O14646 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CHD1O14646 AC092580.1-201ENST00000433998 658 ntBASIC24■■□□□ 1.43
CHD1O14646 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC24■■□□□ 1.43
CHD1O14646 VPS18-202ENST00000558474 873 ntTSL 3 BASIC24■■□□□ 1.43
CHD1O14646 AC013553.1-201ENST00000560906 267 ntBASIC24■■□□□ 1.43
CHD1O14646 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC24■■□□□ 1.43
CHD1O14646 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC24■■□□□ 1.43
CHD1O14646 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CHD1O14646 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHD1O14646 AL136172.1-201ENST00000598590 1394 ntBASIC24■■□□□ 1.43
CHD1O14646 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CHD1O14646 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC23.99■■□□□ 1.43
CHD1O14646 ACTG1P19-201ENST00000418987 1116 ntBASIC23.99■■□□□ 1.43
CHD1O14646 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC23.99■■□□□ 1.43
CHD1O14646 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CHD1O14646 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD1O14646 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 EMC4-208ENST00000559078 599 ntTSL 3 BASIC23.99■■□□□ 1.43
CHD1O14646 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
CHD1O14646 APOC1-209ENST00000592885 562 ntTSL 3 BASIC23.99■■□□□ 1.43
CHD1O14646 SIGLEC22P-201ENST00000599104 714 ntBASIC23.99■■□□□ 1.43
CHD1O14646 AC007250.1-201ENST00000608934 338 ntBASIC23.99■■□□□ 1.43
CHD1O14646 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC23.99■■□□□ 1.43
CHD1O14646 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 PHB-210ENST00000511832 1509 ntTSL 2 BASIC23.99■■□□□ 1.43
CHD1O14646 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHD1O14646 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD1O14646 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC23.98■■□□□ 1.43
CHD1O14646 GNG10P1-201ENST00000452289 199 ntBASIC23.98■■□□□ 1.43
CHD1O14646 OR5BD1P-201ENST00000532527 817 ntBASIC23.98■■□□□ 1.43
CHD1O14646 KRT8P1-201ENST00000557533 1207 ntBASIC23.98■■□□□ 1.43
CHD1O14646 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC23.98■■□□□ 1.43
CHD1O14646 BX088702.1-201ENST00000610784 235 ntBASIC23.98■■□□□ 1.43
CHD1O14646 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD1O14646 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC23.98■■□□□ 1.43
CHD1O14646 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD1O14646 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD1O14646 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 AC010900.1-201ENST00000449849 1296 ntBASIC23.98■■□□□ 1.43
CHD1O14646 IGHV1-12-201ENST00000518307 205 ntBASIC23.98■■□□□ 1.43
CHD1O14646 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC23.98■■□□□ 1.43
CHD1O14646 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC23.98■■□□□ 1.43
CHD1O14646 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD1O14646 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD1O14646 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC23.98■■□□□ 1.43
CHD1O14646 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CHD1O14646 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC23.98■■□□□ 1.43
CHD1O14646 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC23.98■■□□□ 1.43
CHD1O14646 AC009090.5-201ENST00000624886 2285 ntBASIC23.98■■□□□ 1.43
CHD1O14646 AC007292.2-201ENST00000593524 1812 ntBASIC23.98■■□□□ 1.43
CHD1O14646 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms