Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRIM6-TRIM34B2RNG4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TRIM6-TRIM34B2RNG4 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
TRIM6-TRIM34B2RNG4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRIM6-TRIM34B2RNG4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 INGX-202ENST00000489074 768 ntBASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 MIR770-201ENST00000390219 98 ntBASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 UGT1A2P-201ENST00000454886 866 ntBASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 RNA5SP421-201ENST00000516864 134 ntBASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM6-TRIM34B2RNG4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 CLK3P2-201ENST00000427566 1453 ntBASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM6-TRIM34B2RNG4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms