Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AL080243.2-201ENST00000418783 582 ntBASIC16.41■□□□□ 0.22
RCCD1A6NED2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 MTDHP5-201ENST00000598980 586 ntBASIC16.41■□□□□ 0.22
RCCD1A6NED2 LINC01115-203ENST00000606068 577 ntBASIC16.41■□□□□ 0.22
RCCD1A6NED2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.41■□□□□ 0.22
RCCD1A6NED2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RCCD1A6NED2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RCCD1A6NED2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 AL133267.1-201ENST00000398220 340 ntBASIC16.4■□□□□ 0.22
RCCD1A6NED2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 HMGB3P14-201ENST00000494195 599 ntBASIC16.4■□□□□ 0.22
RCCD1A6NED2 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 ACTG1P22-201ENST00000603793 1099 ntBASIC16.4■□□□□ 0.22
RCCD1A6NED2 LINC00628-201ENST00000628516 1289 ntBASIC16.4■□□□□ 0.22
RCCD1A6NED2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 AC138969.3-201ENST00000546612 1459 ntBASIC16.4■□□□□ 0.22
RCCD1A6NED2 AC138932.2-201ENST00000548268 1459 ntBASIC16.4■□□□□ 0.22
RCCD1A6NED2 AC126755.4-201ENST00000549796 1459 ntBASIC16.4■□□□□ 0.22
RCCD1A6NED2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RCCD1A6NED2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RCCD1A6NED2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RCCD1A6NED2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.22
RCCD1A6NED2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RCCD1A6NED2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RCCD1A6NED2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCCD1A6NED2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCCD1A6NED2 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.39■□□□□ 0.21
RCCD1A6NED2 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RCCD1A6NED2 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms