Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC22.64■■□□□ 1.22
CDC42BPBQ9Y5S2 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 DNM1P30-201ENST00000563586 452 ntBASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 GMFG-209ENST00000600322 622 ntTSL 5 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 AC025262.2-201ENST00000623975 1056 ntBASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CDC42BPBQ9Y5S2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 AP002803.1-201ENST00000528836 498 ntBASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 MIR3188-201ENST00000583494 85 ntBASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CDC42BPBQ9Y5S2 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 MIR4649-201ENST00000582839 64 ntBASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC087481.3-201ENST00000602886 1894 ntBASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC009884.2-201ENST00000603110 324 ntBASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AL022334.2-201ENST00000610000 484 ntBASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CDC42BPBQ9Y5S2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 RPL8P2-201ENST00000430538 502 ntBASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 MRPL22P1-201ENST00000505398 616 ntBASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC22.61■■□□□ 1.21
CDC42BPBQ9Y5S2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms