Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AP006547.1-201ENST00000563435 692 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 MIR4741-201ENST00000579822 90 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AC126365.1-201ENST00000578585 1514 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AL023775.1-201ENST00000454907 1746 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 TMBIM7P-203ENST00000641617 1718 ntBASIC20.88■□□□□ 0.93
NINLQ9Y2I6 AP000593.2-201ENST00000542775 1433 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 MST1L-201ENST00000442552 2185 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 AC007969.1-201ENST00000433675 447 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 AL591846.1-201ENST00000451736 433 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 RPSAP36-202ENST00000494591 1261 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 FTLP10-202ENST00000505798 471 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 COX5BP1-201ENST00000507622 393 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 CICP11-201ENST00000434745 2827 ntBASIC20.87■□□□□ 0.93
NINLQ9Y2I6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NINLQ9Y2I6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 MIR326-201ENST00000362220 95 ntBASIC20.86■□□□□ 0.93
NINLQ9Y2I6 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 AL391280.1-201ENST00000506969 1062 ntBASIC20.86■□□□□ 0.93
NINLQ9Y2I6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 OR10B1P-201ENST00000601666 907 ntBASIC20.86■□□□□ 0.93
NINLQ9Y2I6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
NINLQ9Y2I6 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 HINT2P1-201ENST00000419438 481 ntBASIC20.85■□□□□ 0.93
NINLQ9Y2I6 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 AC026434.2-201ENST00000506094 1078 ntBASIC20.85■□□□□ 0.93
NINLQ9Y2I6 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NINLQ9Y2I6 AC026740.1-201ENST00000607068 791 ntBASIC20.85■□□□□ 0.93
NINLQ9Y2I6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms