Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 AL607033.1-201ENST00000623900 1599 ntBASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAPPC4Q9Y296 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 TSSK5P-201ENST00000423978 907 ntBASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 CYMP-203ENST00000474680 1263 ntBASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 AL844908.2-201ENST00000609461 460 ntBASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAPPC4Q9Y296 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 AC068587.6-202ENST00000641839 5619 ntBASIC14.21□□□□□ -0.14
TRAPPC4Q9Y296 AC067930.6-201ENST00000623257 4947 ntBASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 AC009477.1-201ENST00000452936 217 ntBASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 AL512638.1-201ENST00000457493 794 ntBASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 RNA5SP421-201ENST00000516864 134 ntBASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC4Q9Y296 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms