Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HCFC1R1Q9NWW0 AL359258.3-201ENST00000622910 2331 ntBASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 CHMP4BP1-201ENST00000556017 588 ntBASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 AC079328.1-201ENST00000560358 952 ntBASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HCFC1R1Q9NWW0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 SDCCAG3P2-201ENST00000326105 1023 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 AL354877.1-201ENST00000424412 413 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 UPF3AP2-201ENST00000457924 1132 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 FTLP10-202ENST00000505798 471 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 AC026434.2-201ENST00000506094 1078 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 DUX4L47-201ENST00000566374 394 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 MIR4683-201ENST00000579659 81 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 AC138649.2-201ENST00000615886 705 ntBASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HCFC1R1Q9NWW0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HCFC1R1Q9NWW0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms