Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ECHDC1Q9NTX5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 AL596325.1-201ENST00000563991 1082 ntBASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ECHDC1Q9NTX5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 NUS1P3-201ENST00000423502 862 ntBASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 RPSAP52-203ENST00000622976 1023 ntBASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 AL157414.3-201ENST00000624276 1954 ntBASIC18.72■□□□□ 0.59
ECHDC1Q9NTX5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ECHDC1Q9NTX5 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms