Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBQLN4Q9NRR5 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 AC104457.1-201ENST00000401024 814 ntBASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 AC008761.3-201ENST00000624803 892 ntBASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBQLN4Q9NRR5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.21□□□□□ -0.14
UBQLN4Q9NRR5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 DBET-201ENST00000630918 3363 ntBASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AC007541.1-201ENST00000570282 1469 ntBASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AL353779.1-201ENST00000434793 351 ntBASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 RN7SL204P-201ENST00000582831 262 ntBASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AL049840.4-201ENST00000602422 811 ntBASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AC093726.1-201ENST00000608064 963 ntBASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBQLN4Q9NRR5 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms