Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC098831.1-202ENST00000438821 336 ntBASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC096734.2-201ENST00000562054 433 ntBASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC002347.1-201ENST00000569543 541 ntBASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 POM121L4P-202ENST00000427789 1891 ntBASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 PMS2P7-201ENST00000506558 1336 ntBASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.56□□□□□ -0.24
C12orf4Q9NQ89 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AC092474.2-201ENST00000424288 719 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AC009947.1-201ENST00000444350 727 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 KRT18P56-201ENST00000507275 550 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 UNC93B6-202ENST00000528242 690 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AC023141.13-201ENST00000604991 943 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 MIR7706-201ENST00000613747 67 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AC007064.4-201ENST00000637740 555 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 PEG13-201ENST00000631594 5667 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 AL109954.1-202ENST00000564051 2148 ntBASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
C12orf4Q9NQ89 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
C12orf4Q9NQ89 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms