Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
SND1-IT1Q9HBX3 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 RPS2P28-201ENST00000314255 741 ntBASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 KRT18P35-201ENST00000510488 1269 ntBASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AC243562.2-201ENST00000561247 970 ntBASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AL137784.3-201ENST00000623858 2288 ntBASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 AC018892.3-201ENST00000623986 2499 ntBASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 BX640514.1-201ENST00000583223 1918 ntBASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
SND1-IT1Q9HBX3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.4□□□□□ -0.74
SND1-IT1Q9HBX3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms