Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 KRT18P43-201ENST00000469825 1281 ntBASIC17.99■□□□□ 0.47
EFCC1Q9HA90 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 AC026410.3-201ENST00000514280 936 ntBASIC17.99■□□□□ 0.47
EFCC1Q9HA90 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.99■□□□□ 0.47
EFCC1Q9HA90 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 AC092978.1-202ENST00000637590 1327 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 RN7SL720P-201ENST00000488178 304 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 AP001582.1-201ENST00000525856 295 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 AC093813.1-201ENST00000605066 256 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 AC132938.4-201ENST00000623835 848 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 NFIC-211ENST00000641145 8399 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 ME2P1-201ENST00000426028 1970 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 AC018735.1-201ENST00000437208 1502 ntBASIC17.98■□□□□ 0.47
EFCC1Q9HA90 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
EFCC1Q9HA90 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 AL133466.1-201ENST00000447582 150 ntBASIC17.97■□□□□ 0.47
EFCC1Q9HA90 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
EFCC1Q9HA90 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms