Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
POLR2J2Q9GZM3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 GHSR-202ENST00000427970 912 ntBASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 AC004835.2-201ENST00000603762 682 ntBASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 AC003101.2-201ENST00000612557 442 ntBASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 AC009093.7-201ENST00000623853 1223 ntBASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 AL645728.2-202ENST00000641679 227 ntBASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.34□□□□□ -0.11
POLR2J2Q9GZM3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.33□□□□□ -0.11
POLR2J2Q9GZM3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
POLR2J2Q9GZM3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
POLR2J2Q9GZM3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
POLR2J2Q9GZM3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
POLR2J2Q9GZM3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.33□□□□□ -0.11
POLR2J2Q9GZM3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
POLR2J2Q9GZM3 AC005912.2-201ENST00000619492 2400 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 AC004461.1-201ENST00000412461 403 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 SPDYE7P-202ENST00000420373 878 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 FAM58DP-201ENST00000428076 619 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 SERBP1P3-201ENST00000459980 809 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 MIR6069-201ENST00000620069 79 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
POLR2J2Q9GZM3 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms