Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 AK4P3-201ENST00000418260 669 ntBASIC12.57□□□□□ -0.4
NKX6-2Q9C056 POM121L3P-201ENST00000419331 1163 ntBASIC12.57□□□□□ -0.4
NKX6-2Q9C056 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC12.57□□□□□ -0.4
NKX6-2Q9C056 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 TERF1P1-201ENST00000311003 1181 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 HCG4-201ENST00000418983 998 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CHCHD2P8-201ENST00000429873 447 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ABCD1P5-201ENST00000445663 754 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 AC096582.2-201ENST00000510860 516 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 REXO1L3P-201ENST00000622202 1288 ntBASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.56□□□□□ -0.4
NKX6-2Q9C056 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms