Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
VRK1Q99986 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.75□□□□□ -0.21
VRK1Q99986 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
VRK1Q99986 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
VRK1Q99986 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.74□□□□□ -0.21
VRK1Q99986 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 AC005034.1-201ENST00000426657 489 ntBASIC13.74□□□□□ -0.21
VRK1Q99986 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 AC009477.1-201ENST00000452936 217 ntBASIC13.74□□□□□ -0.21
VRK1Q99986 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.74□□□□□ -0.21
VRK1Q99986 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.74□□□□□ -0.21
VRK1Q99986 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 AL844908.2-201ENST00000609461 460 ntBASIC13.74□□□□□ -0.21
VRK1Q99986 AC008738.7-201ENST00000609744 511 ntBASIC13.74□□□□□ -0.21
VRK1Q99986 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.74□□□□□ -0.21
VRK1Q99986 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.74□□□□□ -0.21
VRK1Q99986 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.74□□□□□ -0.21
VRK1Q99986 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 AC136621.1-201ENST00000624017 2304 ntBASIC13.74□□□□□ -0.21
VRK1Q99986 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.74□□□□□ -0.21
VRK1Q99986 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.74□□□□□ -0.21
VRK1Q99986 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
VRK1Q99986 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VRK1Q99986 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
VRK1Q99986 AL109954.1-202ENST00000564051 2148 ntBASIC13.73□□□□□ -0.21
VRK1Q99986 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
VRK1Q99986 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
VRK1Q99986 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.73□□□□□ -0.21
VRK1Q99986 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.73□□□□□ -0.21
VRK1Q99986 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
VRK1Q99986 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 CRB3P1-201ENST00000449338 276 ntBASIC13.73□□□□□ -0.21
VRK1Q99986 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 AC009407.1-201ENST00000568958 598 ntBASIC13.73□□□□□ -0.21
VRK1Q99986 MIR4321-201ENST00000592276 80 ntBASIC13.73□□□□□ -0.21
VRK1Q99986 MIR6069-201ENST00000620069 79 ntBASIC13.73□□□□□ -0.21
VRK1Q99986 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
VRK1Q99986 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.73□□□□□ -0.21
VRK1Q99986 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VRK1Q99986 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.73□□□□□ -0.21
VRK1Q99986 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 AC007541.1-201ENST00000570282 1469 ntBASIC13.73□□□□□ -0.21
VRK1Q99986 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.73□□□□□ -0.21
VRK1Q99986 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
VRK1Q99986 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VRK1Q99986 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
VRK1Q99986 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VRK1Q99986 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms