Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.1■□□□□ 0.17
SMOQ99835 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.1■□□□□ 0.17
SMOQ99835 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.1■□□□□ 0.17
SMOQ99835 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
SMOQ99835 AL109954.1-202ENST00000564051 2148 ntBASIC16.1■□□□□ 0.17
SMOQ99835 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SMOQ99835 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.1■□□□□ 0.17
SMOQ99835 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 MIR658-201ENST00000385210 100 ntBASIC16.09■□□□□ 0.17
SMOQ99835 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 CTBP2P5-201ENST00000454986 1264 ntBASIC16.09■□□□□ 0.17
SMOQ99835 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.09■□□□□ 0.17
SMOQ99835 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SMOQ99835 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 AC092384.3-202ENST00000564646 2873 ntBASIC16.09■□□□□ 0.17
SMOQ99835 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.09■□□□□ 0.17
SMOQ99835 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SMOQ99835 MROH4P-201ENST00000431302 1578 ntBASIC16.09■□□□□ 0.17
SMOQ99835 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.09■□□□□ 0.17
SMOQ99835 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMOQ99835 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SMOQ99835 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMOQ99835 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
SMOQ99835 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
SMOQ99835 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SMOQ99835 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.17
SMOQ99835 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
SMOQ99835 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SMOQ99835 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SMOQ99835 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
SMOQ99835 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.08■□□□□ 0.16
SMOQ99835 RPL7P3-201ENST00000441388 714 ntBASIC16.08■□□□□ 0.16
SMOQ99835 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.08■□□□□ 0.16
SMOQ99835 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SMOQ99835 KRT90P-201ENST00000549264 1064 ntBASIC16.08■□□□□ 0.16
SMOQ99835 AL008721.1-201ENST00000609964 604 ntBASIC16.08■□□□□ 0.16
SMOQ99835 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SMOQ99835 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms