Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 RBPMS2P1-201ENST00000437762 623 ntBASIC12.07□□□□□ -0.48
TRGV9Q99603 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV9Q99603 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV9Q99603 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 AL079307.3-201ENST00000556114 283 ntBASIC12.07□□□□□ -0.48
TRGV9Q99603 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV9Q99603 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV9Q99603 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV9Q99603 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.07□□□□□ -0.48
TRGV9Q99603 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV9Q99603 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV9Q99603 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV9Q99603 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
TRGV9Q99603 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 AC104457.1-201ENST00000401024 814 ntBASIC12.06□□□□□ -0.48
TRGV9Q99603 AC074338.1-201ENST00000416825 156 ntBASIC12.06□□□□□ -0.48
TRGV9Q99603 SPDYE14P-201ENST00000442619 822 ntBASIC12.06□□□□□ -0.48
TRGV9Q99603 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 AC026150.2-201ENST00000564693 1156 ntBASIC12.06□□□□□ -0.48
TRGV9Q99603 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.06□□□□□ -0.48
TRGV9Q99603 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
TRGV9Q99603 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
TRGV9Q99603 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
TRGV9Q99603 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
TRGV9Q99603 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms