Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AC011467.4-201ENST00000594891 528 ntBASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AC116407.4-201ENST00000623319 1061 ntBASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 KRT8P24-201ENST00000560290 1559 ntBASIC14.6□□□□□ -0.07
NR1H4Q96RI1 BEND3P3-201ENST00000611030 2440 ntBASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AC020658.7-201ENST00000624274 2442 ntBASIC14.6□□□□□ -0.07
NR1H4Q96RI1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 IER3-202ENST00000376377 1350 ntBASIC14.6□□□□□ -0.07
NR1H4Q96RI1 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.6□□□□□ -0.07
NR1H4Q96RI1 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 KRT17P6-201ENST00000453795 1220 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC074051.2-201ENST00000565115 352 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC010331.1-201ENST00000611423 582 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 NSUN5P1-202ENST00000421140 1535 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 NSUN5P2-203ENST00000457352 1529 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC055811.4-201ENST00000624039 1754 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 BNIP3P1-202ENST00000550043 1585 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC018442.1-201ENST00000421439 2061 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC114271.1-201ENST00000612689 2813 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 AC073548.1-201ENST00000624088 1882 ntBASIC14.59□□□□□ -0.07
NR1H4Q96RI1 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
NR1H4Q96RI1 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
NR1H4Q96RI1 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 569.1 ms