Protein–RNA interactions for Protein: Q96P50

ACAP3, Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAP3Q96P50 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ACAP3Q96P50 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
ACAP3Q96P50 PKD1P5-201ENST00000532415 10291 ntBASIC16.72■□□□□ 0.27
ACAP3Q96P50 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 AC087481.3-201ENST00000602886 1894 ntBASIC16.72■□□□□ 0.27
ACAP3Q96P50 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.72■□□□□ 0.27
ACAP3Q96P50 NUS1P3-201ENST00000423502 862 ntBASIC16.72■□□□□ 0.27
ACAP3Q96P50 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 CROCCP4-201ENST00000457096 498 ntBASIC16.72■□□□□ 0.27
ACAP3Q96P50 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 AL359881.2-201ENST00000602973 570 ntBASIC16.72■□□□□ 0.27
ACAP3Q96P50 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ACAP3Q96P50 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.72■□□□□ 0.27
ACAP3Q96P50 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 BOLA2P3-201ENST00000404566 256 ntBASIC16.71■□□□□ 0.27
ACAP3Q96P50 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 KRT18P25-201ENST00000508931 1278 ntBASIC16.71■□□□□ 0.27
ACAP3Q96P50 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 AL008721.1-201ENST00000609964 604 ntBASIC16.71■□□□□ 0.27
ACAP3Q96P50 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 AC007787.1-201ENST00000588095 1583 ntBASIC16.71■□□□□ 0.27
ACAP3Q96P50 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.71■□□□□ 0.27
ACAP3Q96P50 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ACAP3Q96P50 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms