Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 AC126365.1-201ENST00000578585 1514 ntBASIC14.66□□□□□ -0.06
COL21A1Q96P44 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.66□□□□□ -0.06
COL21A1Q96P44 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL21A1Q96P44 LINC00528-201ENST00000600723 2160 ntBASIC14.66□□□□□ -0.06
COL21A1Q96P44 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AC148477.4-201ENST00000613430 1793 ntBASIC14.65□□□□□ -0.06
COL21A1Q96P44 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AL607033.1-201ENST00000623900 1599 ntBASIC14.65□□□□□ -0.06
COL21A1Q96P44 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AL512361.1-201ENST00000554200 418 ntBASIC14.65□□□□□ -0.06
COL21A1Q96P44 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.65□□□□□ -0.06
COL21A1Q96P44 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.65□□□□□ -0.06
COL21A1Q96P44 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL21A1Q96P44 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AC013726.1-201ENST00000563747 2285 ntBASIC14.64□□□□□ -0.07
COL21A1Q96P44 AC007191.1-201ENST00000623179 2995 ntBASIC14.64□□□□□ -0.07
COL21A1Q96P44 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 TSSK5P-201ENST00000423978 907 ntBASIC14.64□□□□□ -0.07
COL21A1Q96P44 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
COL21A1Q96P44 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.64□□□□□ -0.07
COL21A1Q96P44 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms